Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 TOMM22P5-201ENST00000416399 439 ntBASIC17.59■□□□□ 0.41
NCLP19338 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.59■□□□□ 0.41
NCLP19338 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.59■□□□□ 0.41
NCLP19338 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.59■□□□□ 0.41
NCLP19338 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.59■□□□□ 0.41
NCLP19338 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 SPDYE22P-201ENST00000582158 798 ntBASIC17.59■□□□□ 0.41
NCLP19338 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.59■□□□□ 0.41
NCLP19338 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.59■□□□□ 0.41
NCLP19338 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NCLP19338 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 AC105206.1-202ENST00000314927 2368 ntBASIC17.59■□□□□ 0.41
NCLP19338 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.59■□□□□ 0.41
NCLP19338 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCLP19338 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.58■□□□□ 0.41
NCLP19338 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NCLP19338 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCLP19338 PCDHA5-203ENST00000614258 4248 ntBASIC17.58■□□□□ 0.41
NCLP19338 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC17.58■□□□□ 0.41
NCLP19338 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.58■□□□□ 0.4
NCLP19338 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.58■□□□□ 0.4
NCLP19338 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NCLP19338 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.58■□□□□ 0.4
NCLP19338 AC005225.4-201ENST00000557330 545 ntBASIC17.58■□□□□ 0.4
NCLP19338 MIR497HG-202ENST00000572453 3838 ntBASIC17.58■□□□□ 0.4
NCLP19338 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NCLP19338 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC17.58■□□□□ 0.4
NCLP19338 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCLP19338 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.58■□□□□ 0.4
NCLP19338 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NCLP19338 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCLP19338 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NCLP19338 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.57■□□□□ 0.4
NCLP19338 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.57■□□□□ 0.4
NCLP19338 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.57■□□□□ 0.4
NCLP19338 AC135586.1-201ENST00000539323 574 ntBASIC17.57■□□□□ 0.4
NCLP19338 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
NCLP19338 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.57■□□□□ 0.4
NCLP19338 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.57■□□□□ 0.4
NCLP19338 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.57■□□□□ 0.4
NCLP19338 AL662799.1-202ENST00000614205 422 ntBASIC17.57■□□□□ 0.4
NCLP19338 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.57■□□□□ 0.4
NCLP19338 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.57■□□□□ 0.4
NCLP19338 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCLP19338 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.57■□□□□ 0.4
NCLP19338 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NCLP19338 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCLP19338 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms