Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CCDC188H7C350 AC124283.3-201ENST00000570869 594 ntBASIC15.27■□□□□ 0.04
CCDC188H7C350 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC188H7C350 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC188H7C350 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC188H7C350 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC188H7C350 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC188H7C350 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC188H7C350 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC188H7C350 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC188H7C350 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC188H7C350 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CCDC188H7C350 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.27■□□□□ 0.03
CCDC188H7C350 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC188H7C350 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC188H7C350 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC188H7C350 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCDC188H7C350 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC188H7C350 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 FAM86GP-201ENST00000448322 971 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 AC004967.1-201ENST00000453589 447 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC188H7C350 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC188H7C350 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC188H7C350 IGHV3-42-201ENST00000520410 361 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 AC104794.3-201ENST00000566840 1248 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC188H7C350 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 AC022144.1-201ENST00000602255 1580 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC188H7C350 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 DMBT1P1-203ENST00000636837 4628 ntBASIC15.26■□□□□ 0.03
CCDC188H7C350 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC188H7C350 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CCDC188H7C350 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC188H7C350 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC188H7C350 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC188H7C350 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC188H7C350 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC188H7C350 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC188H7C350 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCDC188H7C350 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC188H7C350 MIR943-201ENST00000401286 94 ntBASIC15.25■□□□□ 0.03
CCDC188H7C350 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 AC104596.2-201ENST00000512793 793 ntBASIC15.25■□□□□ 0.03
CCDC188H7C350 DOC2GP-202ENST00000514950 1163 ntBASIC15.25■□□□□ 0.03
CCDC188H7C350 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC188H7C350 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms