Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 MIR645-201ENST00000385283 94 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC097065.1-201ENST00000425737 517 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AL354861.1-201ENST00000445213 355 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AP000911.2-201ENST00000534330 502 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC138701.2-201ENST00000553634 226 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC105137.3-201ENST00000617588 984 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC127024.7-201ENST00000625101 200 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC090502.4-201ENST00000551714 1386 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 TCAF2P1-201ENST00000291129 2421 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC022532.1-201ENST00000624563 1728 ntBASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.06■□□□□ 0
HCFC1R1Q9NWW0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
HCFC1R1Q9NWW0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 LYPLA2P1-203ENST00000447689 696 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 KRT18P66-201ENST00000452970 1269 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 RPL18AP8-201ENST00000486071 528 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 HERC2P11-201ENST00000562845 725 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AC100756.2-201ENST00000569537 736 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 RN7SL470P-201ENST00000583069 259 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 AC090386.2-201ENST00000623010 1039 ntBASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.05■□□□□ -0
HCFC1R1Q9NWW0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms