Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTA1Q9NP79 BRD7P5-201ENST00000299197 1822 ntBASIC16.24■□□□□ 0.19
VTA1Q9NP79 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VTA1Q9NP79 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AL161932.2-201ENST00000435436 679 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 AL354861.1-201ENST00000445213 355 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ALG1L13P-202ENST00000519320 584 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AP003398.1-201ENST00000531124 318 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AP000911.2-201ENST00000534330 502 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 RN7SL470P-201ENST00000583069 259 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC073911.3-201ENST00000624401 631 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 HLA-C-210ENST00000640219 976 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 AJ011931.1-201ENST00000618749 2492 ntBASIC16.23■□□□□ 0.19
VTA1Q9NP79 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VTA1Q9NP79 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VTA1Q9NP79 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 MYADML-201ENST00000474610 2147 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 GUSBP10-201ENST00000417412 665 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.22■□□□□ 0.19
VTA1Q9NP79 AC092638.2-201ENST00000441105 947 ntBASIC16.22■□□□□ 0.19
VTA1Q9NP79 LYPLA2P1-203ENST00000447689 696 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms