Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ACTBP14-201ENST00000411655 1089 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AC005011.1-201ENST00000455206 210 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 RN7SL479P-201ENST00000472003 300 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 TPI1P2-201ENST00000491343 752 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 FP325317.1-201ENST00000539936 1042 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AC073592.10-201ENST00000624789 597 ntBASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC078925.2-201ENST00000624013 1973 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AL031577.1-201ENST00000339867 399 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 OR2W2P-201ENST00000406313 909 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 RPL3P2-204ENST00000413027 1203 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 BX679664.3-201ENST00000414070 555 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 PTPA-219ENST00000435305 530 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC113935.1-201ENST00000471722 555 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC096919.1-201ENST00000472730 652 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 HINT1-208ENST00000513012 583 ntTSL 4 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC005740.1-201ENST00000515639 522 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC133555.4-201ENST00000569081 152 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC006273.1-201ENST00000606966 861 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 uc_338.24-201ENST00000617802 182 ntBASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL25A1Q9BXS0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms