Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 LINC01101-201ENST00000622953 1884 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC007191.1-201ENST00000623179 2995 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC106794.1-201ENST00000506935 792 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC005730.2-201ENST00000564549 1184 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 MIR3615-201ENST00000581999 87 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 AC020914.3-201ENST00000594712 304 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 BX088702.1-201ENST00000610784 235 ntBASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SSBP3Q9BWW4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 272.6 ms