Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 HLA-K-203ENST00000430151 1046 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 FAM8A4P-201ENST00000435433 1213 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 RPL13AP20-201ENST00000459725 609 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AL137783.1-201ENST00000623494 1896 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 CICP8-201ENST00000455800 2813 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCGF1Q9BSM1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TUBB1P2-201ENST00000422712 1306 ntBASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TUBB1P1-201ENST00000503144 1300 ntBASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 COL6A4P2-202ENST00000504443 2753 ntBASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 CD8B2-202ENST00000417670 633 ntBASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms