Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC005562.1-201ENST00000583030 3219 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 HLA-V-201ENST00000429037 534 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 RNU6-362P-201ENST00000516736 90 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 SNX29P1-201ENST00000548357 1007 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 AC092574.1-201ENST00000609771 420 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 AL138960.2-201ENST00000625145 535 ntBASIC13.34□□□□□ -0.27
USB1Q9BQ65 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
USB1Q9BQ65 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
USB1Q9BQ65 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
USB1Q9BQ65 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
USB1Q9BQ65 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.33□□□□□ -0.27
USB1Q9BQ65 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
USB1Q9BQ65 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
USB1Q9BQ65 MSTO2P-201ENST00000314835 1709 ntBASIC13.33□□□□□ -0.27
USB1Q9BQ65 AC105250.1-201ENST00000509378 2057 ntBASIC13.33□□□□□ -0.27
USB1Q9BQ65 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.33□□□□□ -0.27
USB1Q9BQ65 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 RNU1-114P-201ENST00000365297 166 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 AL355994.2-201ENST00000447882 704 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 SEPHS1P7-201ENST00000452995 1177 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 MTND1P8-201ENST00000571424 950 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 MIR6799-201ENST00000620297 69 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC138951.2-201ENST00000623455 1161 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC012508.2-201ENST00000567613 1472 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
USB1Q9BQ65 AC005912.2-201ENST00000619492 2400 ntBASIC13.33□□□□□ -0.28
USB1Q9BQ65 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
USB1Q9BQ65 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms