Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC132812.1-201ENST00000583145 892 ntBASIC18.69■□□□□ 0.58
ABCA3Q99758 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ABCA3Q99758 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 RPL13AP3-202ENST00000494676 1473 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ABCA3Q99758 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ABCA3Q99758 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCA3Q99758 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCA3Q99758 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA3Q99758 USP17L6P-201ENST00000382470 1197 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 AL356000.1-201ENST00000441073 1238 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 AC233724.9-201ENST00000511694 407 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 MIR5091-201ENST00000578707 93 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA3Q99758 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 MIR6125-201ENST00000618986 96 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ABCA3Q99758 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA3Q99758 AL008638.4-201ENST00000624792 1315 ntBASIC18.68■□□□□ 0.58
ABCA3Q99758 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ABCA3Q99758 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCA3Q99758 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
ABCA3Q99758 AC010086.2-201ENST00000428616 226 ntBASIC18.67■□□□□ 0.58
ABCA3Q99758 AC053503.3-201ENST00000448375 114 ntBASIC18.67■□□□□ 0.58
ABCA3Q99758 AC007679.1-201ENST00000458609 502 ntBASIC18.67■□□□□ 0.58
ABCA3Q99758 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC18.67■□□□□ 0.58
ABCA3Q99758 RPL29P2-201ENST00000488409 460 ntBASIC18.67■□□□□ 0.58
ABCA3Q99758 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ABCA3Q99758 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ABCA3Q99758 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCA3Q99758 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA3Q99758 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ABCA3Q99758 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCA3Q99758 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 KRT8P6-201ENST00000399259 1207 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 SNRPCP15-201ENST00000424055 192 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 AC087072.1-201ENST00000603727 421 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.66■□□□□ 0.58
ABCA3Q99758 AC005865.2-202ENST00000635814 725 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCA3Q99758 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ABCA3Q99758 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA3Q99758 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA3Q99758 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 AC008494.1-201ENST00000497612 796 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCA3Q99758 ABCC6P1-203ENST00000565566 1170 ntBASIC18.66■□□□□ 0.58
ABCA3Q99758 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ABCA3Q99758 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA3Q99758 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms