Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.18□□□□□ -0.46
S1PR3Q99500 INE1-201ENST00000456273 945 ntBASIC12.18□□□□□ -0.46
S1PR3Q99500 RN7SL837P-201ENST00000463010 287 ntBASIC12.18□□□□□ -0.46
S1PR3Q99500 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
S1PR3Q99500 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.18□□□□□ -0.46
S1PR3Q99500 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.18□□□□□ -0.46
S1PR3Q99500 AC003102.2-201ENST00000589195 1469 ntBASIC12.18□□□□□ -0.46
S1PR3Q99500 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.18□□□□□ -0.46
S1PR3Q99500 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.18□□□□□ -0.46
S1PR3Q99500 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
S1PR3Q99500 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.18□□□□□ -0.46
S1PR3Q99500 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
S1PR3Q99500 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
S1PR3Q99500 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC134312.5-201ENST00000568031 1313 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 MRPL37P1-201ENST00000592451 1337 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AL512384.1-201ENST00000406683 331 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 BAATP1-201ENST00000412284 1225 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 NME2P1-201ENST00000426182 414 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC245100.3-201ENST00000441281 285 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC007389.4-201ENST00000454674 793 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 TDH-203ENST00000531764 1110 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC005225.4-201ENST00000557330 545 ntBASIC12.17□□□□□ -0.46
S1PR3Q99500 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
S1PR3Q99500 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
S1PR3Q99500 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
S1PR3Q99500 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
S1PR3Q99500 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms