Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AL139400.1-201ENST00000366220 510 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC114501.2-201ENST00000439631 535 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 FAM86LP-201ENST00000478302 853 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC092865.5-201ENST00000545435 363 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC036164.1-201ENST00000570544 333 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AL049840.4-201ENST00000602422 811 ntBASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NSMCE2Q96MF7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NSMCE2Q96MF7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NSMCE2Q96MF7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AC114271.1-201ENST00000612689 2813 ntBASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AC027369.6-201ENST00000525520 931 ntBASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AC093813.1-201ENST00000605066 256 ntBASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AL844908.2-201ENST00000609461 460 ntBASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NSMCE2Q96MF7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms