Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AC004461.1-201ENST00000412461 403 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 MIR3687-2-201ENST00000577708 61 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 KRT18P8-201ENST00000581937 1246 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AC006538.3-201ENST00000612495 578 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TEX28P1-201ENST00000613479 1221 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 MIR3687-1-201ENST00000614492 61 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TEX28P2-201ENST00000617764 1221 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AC024075.2-201ENST00000598112 1473 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 DMBT1P1-203ENST00000636837 4628 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ELL2P1-201ENST00000413990 1906 ntBASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AC139712.1-201ENST00000378256 1875 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 DLX4-206ENST00000611342 1662 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 ALG1L5P-201ENST00000482043 771 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AC010327.4-202ENST00000591484 748 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 MTDHP5-201ENST00000598980 586 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 BAP1-211ENST00000615113 489 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms