Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AP001002.3-201ENST00000623482 206 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC018735.1-201ENST00000437208 1502 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 ST20-AS1-201ENST00000560255 4223 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CICP17-201ENST00000418553 2377 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC012508.2-201ENST00000567613 1472 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AL136309.1-201ENST00000403917 691 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 CHMP1AP1-201ENST00000445563 662 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AKR7A2P1-201ENST00000460134 915 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SCARNA20.5-201ENST00000516991 142 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC020914.3-201ENST00000594712 304 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC007663.3-201ENST00000609632 465 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AL137783.1-201ENST00000623494 1896 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 FKBP4P6-201ENST00000457486 1332 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms