Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL021578.1-201ENST00000613646 709 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AC138627.1-207ENST00000641560 1006 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 CICP24-201ENST00000605464 2705 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AC113367.3-201ENST00000508316 1912 ntBASIC15.73■□□□□ 0.11
BEST2Q8NFU1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.73■□□□□ 0.11
BEST2Q8NFU1 CYP46A4P-201ENST00000414953 267 ntBASIC15.73■□□□□ 0.11
BEST2Q8NFU1 SPTLC1P5-201ENST00000450718 252 ntBASIC15.73■□□□□ 0.11
BEST2Q8NFU1 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AL136379.1-201ENST00000623471 2642 ntBASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST2Q8NFU1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 RN7SKP214-201ENST00000364208 315 ntBASIC15.72■□□□□ 0.11
BEST2Q8NFU1 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AL662890.1-201ENST00000396818 632 ntBASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 RHOQP1-201ENST00000555758 579 ntBASIC15.72■□□□□ 0.11
BEST2Q8NFU1 SORD2P-201ENST00000558556 1069 ntBASIC15.72■□□□□ 0.11
BEST2Q8NFU1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 NAP1L6-202ENST00000641404 1222 ntBASIC15.72■□□□□ 0.11
BEST2Q8NFU1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST2Q8NFU1 AC067750.1-201ENST00000608826 6545 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms