Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AC018463.1-201ENST00000456674 917 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 RPL18AP3-201ENST00000462885 528 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 RN7SL275P-201ENST00000582762 335 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 MIR6720-201ENST00000611664 98 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 LINC01783-202ENST00000614408 828 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 BX284668.2-205ENST00000619677 828 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 FRMPD2B-201ENST00000431305 1347 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CTC1Q2NKJ3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 AC010234.1-201ENST00000494599 870 ntBASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 AL138725.1-201ENST00000407347 1314 ntBASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CTC1Q2NKJ3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CTC1Q2NKJ3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms