Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.15■□□□□ 0.34
IRX3P78415 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.15■□□□□ 0.34
IRX3P78415 AC098935.1-201ENST00000446057 611 ntBASIC17.15■□□□□ 0.34
IRX3P78415 CICP12-201ENST00000455801 843 ntBASIC17.15■□□□□ 0.34
IRX3P78415 AC104784.1-201ENST00000473096 294 ntBASIC17.15■□□□□ 0.34
IRX3P78415 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.15■□□□□ 0.34
IRX3P78415 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.15■□□□□ 0.34
IRX3P78415 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.15■□□□□ 0.34
IRX3P78415 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX3P78415 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
IRX3P78415 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 AC073352.2-201ENST00000609385 439 ntBASIC17.15■□□□□ 0.34
IRX3P78415 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.15■□□□□ 0.34
IRX3P78415 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
IRX3P78415 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
IRX3P78415 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IRX3P78415 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.15■□□□□ 0.34
IRX3P78415 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
IRX3P78415 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
IRX3P78415 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 RN7SL181P-201ENST00000462921 277 ntBASIC17.14■□□□□ 0.33
IRX3P78415 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.14■□□□□ 0.33
IRX3P78415 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.14■□□□□ 0.33
IRX3P78415 MIR4750-201ENST00000584564 56 ntBASIC17.14■□□□□ 0.33
IRX3P78415 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 AL805961.1-201ENST00000642026 753 ntBASIC17.14■□□□□ 0.33
IRX3P78415 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX3P78415 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IRX3P78415 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IRX3P78415 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 CICP24-201ENST00000605464 2705 ntBASIC17.13■□□□□ 0.33
IRX3P78415 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX3P78415 AL627231.1-201ENST00000394467 1125 ntBASIC17.13■□□□□ 0.33
IRX3P78415 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.13■□□□□ 0.33
IRX3P78415 AL035414.1-201ENST00000451327 857 ntBASIC17.13■□□□□ 0.33
IRX3P78415 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX3P78415 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.13■□□□□ 0.33
IRX3P78415 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IRX3P78415 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX3P78415 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 AL157813.1-201ENST00000612996 587 ntBASIC17.13■□□□□ 0.33
IRX3P78415 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 AC011491.1-203ENST00000637688 543 ntBASIC17.13■□□□□ 0.33
IRX3P78415 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX3P78415 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX3P78415 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
IRX3P78415 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms