Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
CLK1P49759 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 PCDHA5-203ENST00000614258 4248 ntBASIC13.92□□□□□ -0.18
CLK1P49759 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.92□□□□□ -0.18
CLK1P49759 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLK1P49759 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.92□□□□□ -0.18
CLK1P49759 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLK1P49759 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 MIR661-201ENST00000384842 89 ntBASIC13.91□□□□□ -0.18
CLK1P49759 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLK1P49759 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.91□□□□□ -0.18
CLK1P49759 NUS1P3-201ENST00000423502 862 ntBASIC13.91□□□□□ -0.18
CLK1P49759 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 AC092552.1-201ENST00000547243 906 ntBASIC13.91□□□□□ -0.18
CLK1P49759 AC123567.1-201ENST00000548294 1261 ntBASIC13.91□□□□□ -0.18
CLK1P49759 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.91□□□□□ -0.18
CLK1P49759 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 AL662799.1-202ENST00000614205 422 ntBASIC13.91□□□□□ -0.18
CLK1P49759 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.91□□□□□ -0.18
CLK1P49759 AC012508.2-201ENST00000567613 1472 ntBASIC13.91□□□□□ -0.18
CLK1P49759 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.91□□□□□ -0.18
CLK1P49759 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLK1P49759 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CLK1P49759 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLK1P49759 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.9□□□□□ -0.18
CLK1P49759 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.9□□□□□ -0.18
CLK1P49759 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLK1P49759 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.9□□□□□ -0.18
CLK1P49759 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
CLK1P49759 API5-211ENST00000534695 560 ntTSL 5 BASIC13.9□□□□□ -0.18
CLK1P49759 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.9□□□□□ -0.18
CLK1P49759 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
CLK1P49759 SAMD11P1-201ENST00000571429 661 ntBASIC13.9□□□□□ -0.18
CLK1P49759 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms