Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MTHFRP42898 FAM45BP-202ENST00000592932 1624 ntBASIC15.32■□□□□ 0.04
MTHFRP42898 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MTHFRP42898 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.31■□□□□ 0.04
MTHFRP42898 AC141586.1-203ENST00000567242 366 ntBASIC15.31■□□□□ 0.04
MTHFRP42898 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 AC127024.7-201ENST00000625101 200 ntBASIC15.31■□□□□ 0.04
MTHFRP42898 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.31■□□□□ 0.04
MTHFRP42898 AP001184.1-201ENST00000637936 376 ntBASIC15.31■□□□□ 0.04
MTHFRP42898 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MTHFRP42898 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.31■□□□□ 0.04
MTHFRP42898 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MTHFRP42898 AL359258.3-201ENST00000622910 2331 ntBASIC15.31■□□□□ 0.04
MTHFRP42898 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MTHFRP42898 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.31■□□□□ 0.04
MTHFRP42898 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
MTHFRP42898 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MTHFRP42898 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.3■□□□□ 0.04
MTHFRP42898 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 KRT18P36-201ENST00000411618 1276 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 HIST2H2BA-201ENST00000412169 381 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 ORAOV1P1-201ENST00000503108 395 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MTHFRP42898 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 AC025262.2-201ENST00000623975 1056 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 AC005618.3-201ENST00000624928 458 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFRP42898 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 TMBIM7P-203ENST00000641617 1718 ntBASIC15.3■□□□□ 0.04
MTHFRP42898 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
MTHFRP42898 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFRP42898 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFRP42898 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 AL109954.1-202ENST00000564051 2148 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms