Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNA3P32297 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA3P32297 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNA3P32297 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CHRNA3P32297 KRT8P35-201ENST00000483942 1338 ntBASIC15.52■□□□□ 0.08
CHRNA3P32297 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNA3P32297 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNA3P32297 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNA3P32297 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNA3P32297 AC007274.1-201ENST00000439805 662 ntBASIC15.52■□□□□ 0.08
CHRNA3P32297 RPL7P3-201ENST00000441388 714 ntBASIC15.52■□□□□ 0.08
CHRNA3P32297 AC114812.1-204ENST00000449669 728 ntBASIC15.52■□□□□ 0.08
CHRNA3P32297 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CHRNA3P32297 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CHRNA3P32297 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNA3P32297 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNA3P32297 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.52■□□□□ 0.08
CHRNA3P32297 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA3P32297 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.52■□□□□ 0.07
CHRNA3P32297 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CHRNA3P32297 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.52■□□□□ 0.07
CHRNA3P32297 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CHRNA3P32297 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.52■□□□□ 0.07
CHRNA3P32297 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 AC011840.2-201ENST00000563063 1520 ntBASIC15.52■□□□□ 0.07
CHRNA3P32297 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.52■□□□□ 0.07
CHRNA3P32297 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CHRNA3P32297 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.52■□□□□ 0.07
CHRNA3P32297 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA3P32297 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.52■□□□□ 0.07
CHRNA3P32297 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 RNU1-114P-201ENST00000365297 166 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 KLF2P2-201ENST00000416807 1039 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 C2orf27AP3-201ENST00000434123 579 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 RPS2P32-201ENST00000439199 892 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNA3P32297 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.51■□□□□ 0.07
CHRNA3P32297 GNRHR2-203ENST00000581100 1187 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 AC244669.2-201ENST00000612320 853 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 AL354718.3-201ENST00000616414 581 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 CR382287.1-201ENST00000623954 586 ntBASIC15.51■□□□□ 0.07
CHRNA3P32297 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA3P32297 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA3P32297 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA3P32297 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA3P32297 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA3P32297 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms