Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL1P22362 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL1P22362 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL1P22362 AC111170.3-201ENST00000624282 2464 ntBASIC12.6□□□□□ -0.39
CCL1P22362 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL1P22362 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL1P22362 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL1P22362 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.59□□□□□ -0.39
CCL1P22362 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 COX5BP1-201ENST00000507622 393 ntBASIC12.59□□□□□ -0.39
CCL1P22362 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL1P22362 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL1P22362 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 AL022328.1-201ENST00000610050 478 ntBASIC12.59□□□□□ -0.39
CCL1P22362 ZACNP1-201ENST00000612259 710 ntBASIC12.59□□□□□ -0.39
CCL1P22362 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCL1P22362 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCL1P22362 AGAP10P-201ENST00000454844 2418 ntBASIC12.59□□□□□ -0.39
CCL1P22362 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 AC073548.1-201ENST00000624088 1882 ntBASIC12.59□□□□□ -0.39
CCL1P22362 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL1P22362 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL1P22362 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL1P22362 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL1P22362 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CCL1P22362 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CCL1P22362 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CCL1P22362 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CCL1P22362 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL1P22362 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL1P22362 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL1P22362 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCL1P22362 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CCL1P22362 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL1P22362 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL1P22362 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms