Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CAPN3P20807 AC092933.1-201ENST00000393644 945 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 EIF3FP3-201ENST00000434851 1086 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPN3P20807 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 AC007389.4-201ENST00000454674 793 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 RN7SL837P-201ENST00000463010 287 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 RN7SL399P-201ENST00000471648 279 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.18□□□□□ -0.14
CAPN3P20807 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 CHCHD2P3-201ENST00000603038 451 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 MIR6074-201ENST00000612054 107 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 AC007431.3-201ENST00000623221 587 ntBASIC14.18□□□□□ -0.14
CAPN3P20807 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.18□□□□□ -0.14
CAPN3P20807 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPN3P20807 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPN3P20807 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPN3P20807 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CAPN3P20807 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 REXO1L6P-201ENST00000603433 1515 ntBASIC14.17□□□□□ -0.14
CAPN3P20807 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 AC015688.4-201ENST00000580780 1647 ntBASIC14.17□□□□□ -0.14
CAPN3P20807 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.17□□□□□ -0.14
CAPN3P20807 TLE1P1-201ENST00000422965 589 ntBASIC14.17□□□□□ -0.14
CAPN3P20807 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CAPN3P20807 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPN3P20807 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPN3P20807 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CAPN3P20807 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CAPN3P20807 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPN3P20807 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms