Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 AC041040.2-201ENST00000622926 2899 ntBASIC16.09■□□□□ 0.17
CLTAP09496 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.09■□□□□ 0.17
CLTAP09496 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.09■□□□□ 0.17
CLTAP09496 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.09■□□□□ 0.17
CLTAP09496 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.09■□□□□ 0.17
CLTAP09496 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.09■□□□□ 0.17
CLTAP09496 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.09■□□□□ 0.17
CLTAP09496 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.09■□□□□ 0.17
CLTAP09496 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLTAP09496 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.09■□□□□ 0.17
CLTAP09496 AL118558.3-201ENST00000607414 1079 ntBASIC16.09■□□□□ 0.17
CLTAP09496 AL022328.3-201ENST00000607943 679 ntBASIC16.09■□□□□ 0.17
CLTAP09496 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.09■□□□□ 0.17
CLTAP09496 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.09■□□□□ 0.17
CLTAP09496 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.09■□□□□ 0.17
CLTAP09496 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLTAP09496 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLTAP09496 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.08■□□□□ 0.17
CLTAP09496 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.08■□□□□ 0.17
CLTAP09496 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLTAP09496 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.08■□□□□ 0.17
CLTAP09496 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.17
CLTAP09496 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CLTAP09496 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLTAP09496 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLTAP09496 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.08■□□□□ 0.17
CLTAP09496 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CLTAP09496 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.08■□□□□ 0.17
CLTAP09496 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CLTAP09496 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLTAP09496 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLTAP09496 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.08■□□□□ 0.16
CLTAP09496 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.08■□□□□ 0.16
CLTAP09496 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 MIR4783-201ENST00000580343 82 ntBASIC16.08■□□□□ 0.16
CLTAP09496 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.08■□□□□ 0.16
CLTAP09496 AC027601.3-201ENST00000622907 509 ntBASIC16.08■□□□□ 0.16
CLTAP09496 AL162426.1-201ENST00000624141 743 ntBASIC16.08■□□□□ 0.16
CLTAP09496 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 E2F3P2-201ENST00000447755 1422 ntBASIC16.08■□□□□ 0.16
CLTAP09496 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
CLTAP09496 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CLTAP09496 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLTAP09496 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CLTAP09496 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLTAP09496 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLTAP09496 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms