Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
APOBP04114 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 TMBIM7P-203ENST00000641617 1718 ntBASIC8.78□□□□□ -1
APOBP04114 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
APOBP04114 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC8.78□□□□□ -1
APOBP04114 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC8.78□□□□□ -1
APOBP04114 MBP-230ENST00000528160 584 ntTSL 5 BASIC8.78□□□□□ -1
APOBP04114 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC8.78□□□□□ -1
APOBP04114 RN7SL524P-201ENST00000581152 300 ntBASIC8.78□□□□□ -1
APOBP04114 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
APOBP04114 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1
APOBP04114 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC8.77□□□□□ -1
APOBP04114 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC8.77□□□□□ -1
APOBP04114 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC8.77□□□□□ -1
APOBP04114 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC8.77□□□□□ -1
APOBP04114 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 TBC1D3P6-201ENST00000505954 962 ntBASIC8.77□□□□□ -1.01
APOBP04114 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC8.77□□□□□ -1.01
APOBP04114 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC8.77□□□□□ -1.01
APOBP04114 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 BAK1P2-201ENST00000532665 631 ntBASIC8.77□□□□□ -1.01
APOBP04114 CMC2-204ENST00000562713 573 ntTSL 3 BASIC8.77□□□□□ -1.01
APOBP04114 CMC2-209ENST00000565108 399 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 SSR4-202ENST00000370085 526 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 KRT18P44-201ENST00000416086 1285 ntBASIC8.77□□□□□ -1.01
APOBP04114 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC8.77□□□□□ -1.01
APOBP04114 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 RN7SL76P-201ENST00000482435 289 ntBASIC8.77□□□□□ -1.01
APOBP04114 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
APOBP04114 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
APOBP04114 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
APOBP04114 HNRNPABP1-201ENST00000406003 734 ntBASIC8.77□□□□□ -1.01
APOBP04114 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC8.77□□□□□ -1.01
APOBP04114 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 AC011498.7-201ENST00000624986 2027 ntBASIC8.77□□□□□ -1.01
APOBP04114 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.77□□□□□ -1.01
APOBP04114 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
APOBP04114 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 AL954722.1-201ENST00000431238 259 ntBASIC8.76□□□□□ -1.01
APOBP04114 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
APOBP04114 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 RPS5-205ENST00000598495 800 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 AC010503.4-201ENST00000615487 688 ntBASIC8.76□□□□□ -1.01
APOBP04114 AC026120.2-201ENST00000617239 309 ntBASIC8.76□□□□□ -1.01
APOBP04114 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC8.76□□□□□ -1.01
APOBP04114 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 MYADML-201ENST00000474610 2147 ntBASIC8.76□□□□□ -1.01
APOBP04114 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC8.76□□□□□ -1.01
APOBP04114 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
APOBP04114 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms