Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 MIR326-201ENST00000362220 95 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL5O76039 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL5O76039 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 U91328.1-201ENST00000437528 223 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 HIST2H2BB-201ENST00000449108 381 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL5O76039 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 AC104989.1-201ENST00000519711 778 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDKL5O76039 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL5O76039 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL5O76039 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL5O76039 AL035252.4-201ENST00000624174 288 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL5O76039 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDKL5O76039 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL5O76039 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL5O76039 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 AC016397.2-201ENST00000624848 1985 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL5O76039 AC117489.1-201ENST00000625169 3217 ntBASIC17.06■□□□□ 0.32
CDKL5O76039 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL5O76039 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.05■□□□□ 0.32
CDKL5O76039 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKL5O76039 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKL5O76039 AC005586.2-201ENST00000563946 837 ntBASIC17.05■□□□□ 0.32
CDKL5O76039 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDKL5O76039 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL5O76039 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL5O76039 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL5O76039 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL5O76039 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL5O76039 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL5O76039 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 AC064801.2-201ENST00000625052 1303 ntBASIC17.04■□□□□ 0.32
CDKL5O76039 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms