Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 RHOQP1-201ENST00000555758 579 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 RN7SL163P-201ENST00000583100 276 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC004923.1-202ENST00000642106 209 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC018529.2-202ENST00000611482 3087 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 SALL4P5-201ENST00000419001 1760 ntBASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPA3F8WFD2 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.27
NPIPA3F8WFD2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPA3F8WFD2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPA3F8WFD2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
NPIPA3F8WFD2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC004899.1-201ENST00000424687 1714 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RN7SKP230-201ENST00000365642 335 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 DPM3-202ENST00000368399 517 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TLE1P1-201ENST00000422965 589 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 Z97180.1-201ENST00000445173 988 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC104073.2-201ENST00000453737 312 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RN7SL11P-201ENST00000471305 293 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 BNIP3P13-201ENST00000599968 566 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC022748.3-201ENST00000621828 275 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AL162426.1-201ENST00000624141 743 ntBASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA3F8WFD2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms