Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC104109.2-201ENST00000602919 1418 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 AC022364.1-202ENST00000617468 2409 ntBASIC10.32□□□□□ -0.76
LINC01546A6NGU7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01546A6NGU7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SALL4P6-201ENST00000429385 1691 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 RN7SKP230-201ENST00000365642 335 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC079781.3-201ENST00000449110 356 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 GIMAP3P-201ENST00000495150 836 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC012531.1-201ENST00000562848 2680 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 AC015819.3-201ENST00000624305 2674 ntBASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01546A6NGU7 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 DMBT1P1-203ENST00000636837 4628 ntBASIC10.3□□□□□ -0.76
LINC01546A6NGU7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.3□□□□□ -0.76
LINC01546A6NGU7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01546A6NGU7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms