Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SALL4P5-201ENST00000419001 1760 ntBASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AC004835.2-201ENST00000603762 682 ntBASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AC009093.7-201ENST00000623853 1223 ntBASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AL138799.1-201ENST00000448213 1675 ntBASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AC072061.1-201ENST00000569710 2234 ntBASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 HLA-V-204ENST00000476601 1289 ntBASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TEX28P1-201ENST00000613479 1221 ntBASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TEX28P2-201ENST00000617764 1221 ntBASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 AP001059.3-201ENST00000619053 235 ntBASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV18A0A075B6X5 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms