Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC073347.1-201ENST00000421633 2643 ntBASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC105917.1-201ENST00000506637 2539 ntBASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC234782.1-201ENST00000451950 919 ntBASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTDP1Q9Y5B0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 FTLP1-201ENST00000449155 526 ntBASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTDP1Q9Y5B0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 AL133499.1-201ENST00000596207 608 ntBASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTDP1Q9Y5B0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms