Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC091812.3-201ENST00000621362 345 ntBASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00588Q9Y4M8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AL161670.2-201ENST00000557650 1227 ntBASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 AC097724.1-201ENST00000609581 426 ntBASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms