Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CBX8Q9HC52 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX8Q9HC52 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AGAP12P-201ENST00000585227 2359 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 MIR1233-2-201ENST00000408138 82 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 MIR1233-1-201ENST00000408722 82 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AC114812.1-204ENST00000449669 728 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AP001582.1-201ENST00000525856 295 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 AC135782.3-201ENST00000562782 2105 ntBASIC16.42■□□□□ 0.22
CBX8Q9HC52 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX8Q9HC52 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX8Q9HC52 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 BEND3P3-201ENST00000611030 2440 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TREML5P-201ENST00000421694 576 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 AC120045.2-201ENST00000567334 178 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 AL158211.3-201ENST00000607385 239 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 AC008738.7-201ENST00000609744 511 ntBASIC16.41■□□□□ 0.22
CBX8Q9HC52 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX8Q9HC52 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX8Q9HC52 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms