Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 MIR5189-201ENST00000577370 114 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 AC010319.3-201ENST00000597028 470 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 MIR6805-201ENST00000615055 62 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 AC011840.2-201ENST00000563063 1520 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 FKBP4P6-201ENST00000457486 1332 ntBASIC13.57□□□□□ -0.24
TRIM2Q9C040 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM2Q9C040 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
TRIM2Q9C040 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 TPM3P8-201ENST00000330554 643 ntBASIC13.56□□□□□ -0.24
TRIM2Q9C040 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 AC008735.3-201ENST00000596646 500 ntBASIC13.56□□□□□ -0.24
TRIM2Q9C040 BX088702.1-201ENST00000610784 235 ntBASIC13.56□□□□□ -0.24
TRIM2Q9C040 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 AL138709.1-201ENST00000614840 1693 ntBASIC13.56□□□□□ -0.24
TRIM2Q9C040 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 MSTO2P-201ENST00000314835 1709 ntBASIC13.56□□□□□ -0.24
TRIM2Q9C040 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRIM2Q9C040 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
TRIM2Q9C040 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRIM2Q9C040 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM2Q9C040 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms