Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 FTLP10-202ENST00000505798 471 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AL023803.2-201ENST00000620080 638 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AL928921.2-201ENST00000641325 2442 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 HSPA7-201ENST00000445535 1927 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AC097376.2-205ENST00000610159 5334 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ELK2AP-201ENST00000392510 1007 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AL136309.1-201ENST00000403917 691 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AL133466.1-201ENST00000447582 150 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 UPF3AP2-201ENST00000457924 1132 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 SERPINA13P-202ENST00000478994 924 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 AC021723.1-201ENST00000486306 515 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 AC106794.1-201ENST00000506935 792 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 REXO1L2P-201ENST00000425429 2069 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AC136759.1-202ENST00000530858 2194 ntBASIC13.93□□□□□ -0.18
TM9SF4Q92544 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TM9SF4Q92544 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TM9SF4Q92544 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AC010327.5-201ENST00000586923 3061 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms