Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 BRWD1P1-201ENST00000401091 371 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 MIR1908-201ENST00000410394 80 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AL354877.1-201ENST00000424412 413 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AC007274.1-201ENST00000439805 662 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AL035414.1-201ENST00000451327 857 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AC100827.2-201ENST00000563214 1194 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AC091271.1-201ENST00000611877 1162 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 AC011498.7-201ENST00000624986 2027 ntBASIC15.55■□□□□ 0.08
UBA3Q8TBC4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBA3Q8TBC4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.54■□□□□ 0.08
UBA3Q8TBC4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL162426.1-201ENST00000624141 743 ntBASIC15.54■□□□□ 0.08
UBA3Q8TBC4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBA3Q8TBC4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.53■□□□□ 0.08
UBA3Q8TBC4 AL591846.1-201ENST00000451736 433 ntBASIC15.53■□□□□ 0.08
UBA3Q8TBC4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms