Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 AC023794.5-201ENST00000564380 2157 ntBASIC16.14■□□□□ 0.17
PMS1P54277 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.14■□□□□ 0.17
PMS1P54277 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PMS1P54277 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 AGAP10P-201ENST00000454844 2418 ntBASIC16.14■□□□□ 0.17
PMS1P54277 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PMS1P54277 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
PMS1P54277 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 AC006001.1-201ENST00000325130 474 ntBASIC16.13■□□□□ 0.17
PMS1P54277 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
PMS1P54277 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PMS1P54277 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 CD8B2-202ENST00000417670 633 ntBASIC16.13■□□□□ 0.17
PMS1P54277 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.13■□□□□ 0.17
PMS1P54277 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.13■□□□□ 0.17
PMS1P54277 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.13■□□□□ 0.17
PMS1P54277 TMEM198B-204ENST00000484016 896 ntBASIC16.13■□□□□ 0.17
PMS1P54277 COX5BP1-201ENST00000507622 393 ntBASIC16.13■□□□□ 0.17
PMS1P54277 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PMS1P54277 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 RN7SL713P-201ENST00000582127 302 ntBASIC16.13■□□□□ 0.17
PMS1P54277 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.13■□□□□ 0.17
PMS1P54277 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PMS1P54277 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PMS1P54277 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PMS1P54277 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PMS1P54277 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 AC111170.3-201ENST00000624282 2464 ntBASIC16.12■□□□□ 0.17
PMS1P54277 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.12■□□□□ 0.17
PMS1P54277 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 KRT8P4-201ENST00000509735 1454 ntBASIC16.12■□□□□ 0.17
PMS1P54277 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 CROCCP4-201ENST00000457096 498 ntBASIC16.12■□□□□ 0.17
PMS1P54277 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.12■□□□□ 0.17
PMS1P54277 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.12■□□□□ 0.17
PMS1P54277 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms