Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 AGAP7P-201ENST00000582299 2062 ntBASIC16.09■□□□□ 0.17
CPT1AP50416 AGAP14-201ENST00000624701 2060 ntBASIC16.09■□□□□ 0.17
CPT1AP50416 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPT1AP50416 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.08■□□□□ 0.17
CPT1AP50416 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPT1AP50416 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPT1AP50416 BRD7P5-201ENST00000299197 1822 ntBASIC16.08■□□□□ 0.17
CPT1AP50416 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPT1AP50416 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.08■□□□□ 0.17
CPT1AP50416 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPT1AP50416 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 RPL13AP19-201ENST00000434320 584 ntBASIC16.08■□□□□ 0.16
CPT1AP50416 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.08■□□□□ 0.16
CPT1AP50416 CR383656.3-201ENST00000551315 183 ntBASIC16.08■□□□□ 0.16
CPT1AP50416 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 RN7SL665P-201ENST00000578793 300 ntBASIC16.08■□□□□ 0.16
CPT1AP50416 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.08■□□□□ 0.16
CPT1AP50416 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CPT1AP50416 SIGLEC22P-201ENST00000599104 714 ntBASIC16.08■□□□□ 0.16
CPT1AP50416 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.08■□□□□ 0.16
CPT1AP50416 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.08■□□□□ 0.16
CPT1AP50416 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.08■□□□□ 0.16
CPT1AP50416 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPT1AP50416 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CPT1AP50416 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CPT1AP50416 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPT1AP50416 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CPT1AP50416 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CPT1AP50416 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPT1AP50416 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.07■□□□□ 0.16
CPT1AP50416 OR8T1P-201ENST00000421347 918 ntBASIC16.07■□□□□ 0.16
CPT1AP50416 AC004837.1-201ENST00000446267 564 ntBASIC16.07■□□□□ 0.16
CPT1AP50416 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.07■□□□□ 0.16
CPT1AP50416 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.07■□□□□ 0.16
CPT1AP50416 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CPT1AP50416 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.07■□□□□ 0.16
CPT1AP50416 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms