Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TPM3P8-201ENST00000330554 643 ntBASIC15.31■□□□□ 0.04
MMP13P45452 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 AC016694.1-201ENST00000434179 700 ntBASIC15.31■□□□□ 0.04
MMP13P45452 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 AL591122.2-201ENST00000624125 1853 ntBASIC15.31■□□□□ 0.04
MMP13P45452 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MMP13P45452 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP13P45452 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MMP13P45452 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 POM121L8P-201ENST00000417732 1281 ntBASIC15.3■□□□□ 0.04
MMP13P45452 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
MMP13P45452 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MMP13P45452 POM121L9P-203ENST00000441984 1285 ntBASIC15.3■□□□□ 0.04
MMP13P45452 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 AC007551.1-201ENST00000457394 519 ntBASIC15.3■□□□□ 0.04
MMP13P45452 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
MMP13P45452 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MMP13P45452 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP13P45452 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MMP13P45452 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
MMP13P45452 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP13P45452 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms