Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.79□□□□□ -0.04
LTBRP36941 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.79□□□□□ -0.04
LTBRP36941 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.79□□□□□ -0.04
LTBRP36941 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 TYMSP2-201ENST00000589501 424 ntBASIC14.79□□□□□ -0.04
LTBRP36941 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.79□□□□□ -0.04
LTBRP36941 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.79□□□□□ -0.04
LTBRP36941 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.79□□□□□ -0.04
LTBRP36941 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBRP36941 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 AC090510.3-201ENST00000615831 821 ntBASIC14.79□□□□□ -0.04
LTBRP36941 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBRP36941 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 LINC00115-201ENST00000473798 1317 ntBASIC14.78□□□□□ -0.04
LTBRP36941 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 AC022080.1-201ENST00000366255 781 ntBASIC14.78□□□□□ -0.04
LTBRP36941 AC073210.1-201ENST00000414799 232 ntBASIC14.78□□□□□ -0.04
LTBRP36941 KRT8P30-201ENST00000432100 650 ntBASIC14.78□□□□□ -0.04
LTBRP36941 AL161932.2-201ENST00000435436 679 ntBASIC14.78□□□□□ -0.04
LTBRP36941 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBRP36941 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBRP36941 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 RN7SL455P-201ENST00000580629 282 ntBASIC14.78□□□□□ -0.04
LTBRP36941 AC005777.1-201ENST00000588332 187 ntBASIC14.78□□□□□ -0.04
LTBRP36941 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBRP36941 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.78□□□□□ -0.04
LTBRP36941 GGNBP1-204ENST00000613113 887 ntBASIC14.78□□□□□ -0.04
LTBRP36941 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.78□□□□□ -0.04
LTBRP36941 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LTBRP36941 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBRP36941 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBRP36941 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBRP36941 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.78□□□□□ -0.04
LTBRP36941 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LTBRP36941 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBRP36941 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.77□□□□□ -0.04
LTBRP36941 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.77□□□□□ -0.04
LTBRP36941 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LTBRP36941 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LTBRP36941 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.77□□□□□ -0.04
LTBRP36941 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LTBRP36941 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.77□□□□□ -0.04
LTBRP36941 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.77□□□□□ -0.04
LTBRP36941 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms