Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.85□□□□□ -0.03
XPAP23025 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 AC004898.1-201ENST00000451057 766 ntBASIC14.85□□□□□ -0.03
XPAP23025 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.85□□□□□ -0.03
XPAP23025 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.85□□□□□ -0.03
XPAP23025 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 AC018529.2-202ENST00000611482 3087 ntBASIC14.85□□□□□ -0.03
XPAP23025 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.85□□□□□ -0.03
XPAP23025 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
XPAP23025 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
XPAP23025 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.84□□□□□ -0.03
XPAP23025 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
XPAP23025 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.84□□□□□ -0.03
XPAP23025 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 MIR1247-201ENST00000408206 136 ntBASIC14.84□□□□□ -0.03
XPAP23025 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.84□□□□□ -0.03
XPAP23025 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.84□□□□□ -0.03
XPAP23025 RNMTL1P1-201ENST00000454103 560 ntBASIC14.84□□□□□ -0.03
XPAP23025 CICP12-201ENST00000455801 843 ntBASIC14.84□□□□□ -0.03
XPAP23025 KRT8P13-201ENST00000463294 1010 ntBASIC14.84□□□□□ -0.03
XPAP23025 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AC005740.2-201ENST00000511085 419 ntBASIC14.84□□□□□ -0.03
XPAP23025 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
XPAP23025 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AC132192.2-201ENST00000596206 1147 ntBASIC14.84□□□□□ -0.03
XPAP23025 AC009884.2-201ENST00000603110 324 ntBASIC14.84□□□□□ -0.03
XPAP23025 AC244093.1-201ENST00000610837 814 ntBASIC14.84□□□□□ -0.03
XPAP23025 AC244452.3-201ENST00000636814 210 ntBASIC14.84□□□□□ -0.03
XPAP23025 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 AC015656.1-201ENST00000624209 3578 ntBASIC14.84□□□□□ -0.03
XPAP23025 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XPAP23025 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
XPAP23025 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.84□□□□□ -0.03
XPAP23025 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
XPAP23025 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms