Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHRNB2P17787 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNB2P17787 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNB2P17787 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNB2P17787 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHRNB2P17787 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNB2P17787 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNB2P17787 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNB2P17787 AC079781.5-202ENST00000641784 3743 ntBASIC15.52■□□□□ 0.08
CHRNB2P17787 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNB2P17787 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CHRNB2P17787 TUBB8P4-201ENST00000511806 1324 ntBASIC15.52■□□□□ 0.08
CHRNB2P17787 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNB2P17787 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNB2P17787 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNB2P17787 GAPDHP21-201ENST00000450301 1010 ntBASIC15.52■□□□□ 0.08
CHRNB2P17787 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNB2P17787 CTBP2P5-201ENST00000454986 1264 ntBASIC15.52■□□□□ 0.08
CHRNB2P17787 KRT17P8-201ENST00000540749 863 ntBASIC15.52■□□□□ 0.08
CHRNB2P17787 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNB2P17787 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CHRNB2P17787 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNB2P17787 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNB2P17787 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CHRNB2P17787 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 AL157996.1-201ENST00000624684 2299 ntBASIC15.52■□□□□ 0.07
CHRNB2P17787 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CHRNB2P17787 AC089987.1-201ENST00000551654 2209 ntBASIC15.52■□□□□ 0.07
CHRNB2P17787 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.52■□□□□ 0.07
CHRNB2P17787 PKD1P5-201ENST00000532415 10291 ntBASIC15.52■□□□□ 0.07
CHRNB2P17787 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNB2P17787 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.51■□□□□ 0.07
CHRNB2P17787 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNB2P17787 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AL645933.1-201ENST00000440087 609 ntBASIC15.51■□□□□ 0.07
CHRNB2P17787 HOMER2P2-201ENST00000451621 847 ntBASIC15.51■□□□□ 0.07
CHRNB2P17787 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.51■□□□□ 0.07
CHRNB2P17787 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AC132192.2-201ENST00000596206 1147 ntBASIC15.51■□□□□ 0.07
CHRNB2P17787 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AL162274.1-201ENST00000617191 1098 ntBASIC15.51■□□□□ 0.07
CHRNB2P17787 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AC008687.7-202ENST00000637404 953 ntBASIC15.51■□□□□ 0.07
CHRNB2P17787 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNB2P17787 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNB2P17787 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNB2P17787 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNB2P17787 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNB2P17787 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNB2P17787 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNB2P17787 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNB2P17787 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNB2P17787 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNB2P17787 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms