Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSB-PGBD3P0DP91 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AL162727.3-201ENST00000635661 2787 ntBASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 SIGLEC22P-201ENST00000599104 714 ntBASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC011471.3-201ENST00000623576 402 ntBASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 AC009145.4-201ENST00000625119 1294 ntBASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSB-PGBD3P0DP91 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 GCSHP3-201ENST00000431120 391 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AC093909.3-201ENST00000504783 336 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AC068867.1-201ENST00000559855 150 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AC140113.1-201ENST00000603467 169 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AC007250.1-201ENST00000608934 338 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 BRD7P5-201ENST00000299197 1822 ntBASIC19.23■□□□□ 0.67
CSB-PGBD3P0DP91 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 KHSRPP1-201ENST00000427983 1768 ntBASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms