Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AGAP14-201ENST00000624701 2060 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 AC011840.2-201ENST00000563063 1520 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 CALR4P-201ENST00000431943 946 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 FAM58BP-201ENST00000439056 645 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 AC104306.2-201ENST00000451877 341 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CNOT4O95628 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 AC131206.1-201ENST00000538078 1211 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.14□□□□□ -0.31
CNOT4O95628 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.14□□□□□ -0.31
CNOT4O95628 RN7SL190P-201ENST00000582519 257 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 KRT8P4-201ENST00000509735 1454 ntBASIC13.14□□□□□ -0.31
CNOT4O95628 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
CNOT4O95628 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.14□□□□□ -0.31
CNOT4O95628 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CNOT4O95628 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 CICP14-201ENST00000629111 2732 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 AC131212.3-201ENST00000624087 4219 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 AC010141.1-201ENST00000411585 623 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.13□□□□□ -0.31
CNOT4O95628 IGHJ2P-201ENST00000454480 60 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.13□□□□□ -0.31
CNOT4O95628 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 GCOM2-201ENST00000509133 1104 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.13□□□□□ -0.31
CNOT4O95628 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.13□□□□□ -0.31
CNOT4O95628 MIR4741-201ENST00000579822 90 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.13□□□□□ -0.31
CNOT4O95628 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.13□□□□□ -0.31
CNOT4O95628 AC244452.3-201ENST00000636814 210 ntBASIC13.13□□□□□ -0.31
CNOT4O95628 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CNOT4O95628 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CNOT4O95628 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms