Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.05□□□□□ -0.48
SSSCA1O60232 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 AL157996.1-201ENST00000624684 2299 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.04□□□□□ -0.48
SSSCA1O60232 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 AL627223.1-201ENST00000416693 442 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 MKNK2P1-201ENST00000437526 628 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.04□□□□□ -0.48
SSSCA1O60232 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 SLC25A1P1-201ENST00000528351 927 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.04□□□□□ -0.48
SSSCA1O60232 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
SSSCA1O60232 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 AC105339.1-204ENST00000636249 355 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 AL109936.8-201ENST00000641772 604 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 AC072061.1-201ENST00000569710 2234 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 AL445209.1-201ENST00000607269 3491 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
SSSCA1O60232 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SSSCA1O60232 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSSCA1O60232 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
SSSCA1O60232 AL136172.1-201ENST00000598590 1394 ntBASIC12.04□□□□□ -0.48
SSSCA1O60232 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SSSCA1O60232 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SSSCA1O60232 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SSSCA1O60232 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SSSCA1O60232 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSSCA1O60232 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms