Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 FXNP2-201ENST00000411625 547 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 HINT2P1-201ENST00000419438 481 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 POM121L10P-201ENST00000436994 1285 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 NDUFV2P1-201ENST00000596415 907 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 AC138627.1-207ENST00000641560 1006 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB1Q9Y5F3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 AC091046.1-201ENST00000331871 207 ntBASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 RN7SKP175-201ENST00000408472 289 ntBASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 AC126915.1-201ENST00000522847 1038 ntBASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 AC106820.3-201ENST00000561653 397 ntBASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB1Q9Y5F3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHB1Q9Y5F3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHB1Q9Y5F3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHB1Q9Y5F3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHB1Q9Y5F3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
PCDHB1Q9Y5F3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHB1Q9Y5F3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms