Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.97■□□□□ 0.15
TRMT13Q9NUP7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 OR8T1P-201ENST00000421347 918 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AL512306.1-201ENST00000432698 848 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC092580.1-201ENST00000433998 658 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 DPY19L2P5-201ENST00000456300 331 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 RPL18AP8-201ENST00000486071 528 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 C2orf69P1-201ENST00000563532 1093 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AP000322.3-201ENST00000608665 388 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC006158.1-201ENST00000610661 249 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 AC138035.3-201ENST00000622706 2791 ntBASIC15.96■□□□□ 0.15
TRMT13Q9NUP7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.96■□□□□ 0.14
TRMT13Q9NUP7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 LINC01815-202ENST00000641468 1409 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 MIR645-201ENST00000385283 94 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 RN7SKP109-201ENST00000410592 316 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 AC010234.1-201ENST00000494599 870 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 AC007952.4-201ENST00000573866 637 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 AC138466.4-201ENST00000623965 852 ntBASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRMT13Q9NUP7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms