Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.04□□□□□ -0.16
CGREF1Q99674 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 AC104794.3-201ENST00000566840 1248 ntBASIC14.04□□□□□ -0.16
CGREF1Q99674 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CGREF1Q99674 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.04□□□□□ -0.16
CGREF1Q99674 AL390955.2-201ENST00000603032 514 ntBASIC14.04□□□□□ -0.16
CGREF1Q99674 AC004790.1-201ENST00000612686 536 ntBASIC14.04□□□□□ -0.16
CGREF1Q99674 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
CGREF1Q99674 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.04□□□□□ -0.16
CGREF1Q99674 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CGREF1Q99674 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.04□□□□□ -0.16
CGREF1Q99674 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.04□□□□□ -0.16
CGREF1Q99674 AL591122.2-201ENST00000624125 1853 ntBASIC14.04□□□□□ -0.16
CGREF1Q99674 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CGREF1Q99674 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CGREF1Q99674 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC111170.3-201ENST00000624282 2464 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC134915.1-201ENST00000426461 574 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.03□□□□□ -0.16
CGREF1Q99674 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AP001582.1-201ENST00000525856 295 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.03□□□□□ -0.16
CGREF1Q99674 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 AC022144.1-201ENST00000602255 1580 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CGREF1Q99674 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
CGREF1Q99674 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CGREF1Q99674 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.03□□□□□ -0.16
CGREF1Q99674 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CGREF1Q99674 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CGREF1Q99674 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CGREF1Q99674 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CGREF1Q99674 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CGREF1Q99674 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms