Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC126365.1-201ENST00000578585 1514 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC136759.1-202ENST00000530858 2194 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC007686.3-201ENST00000619017 3487 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AL512430.1-201ENST00000392575 860 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC012362.1-201ENST00000434906 739 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MIR6769A-201ENST00000617340 73 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MIR6858-201ENST00000620733 67 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AC020910.5-201ENST00000623668 1865 ntBASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 RBM8B-201ENST00000555532 525 ntBASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AC005962.1-201ENST00000584100 773 ntBASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AL157813.1-201ENST00000612996 587 ntBASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 AL132780.4-201ENST00000624870 1135 ntBASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTC1Q2NKJ3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms