Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 OR7E155P-201ENST00000412208 1014 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 RNF7-205ENST00000480908 782 ntTSL 4 BASIC18.97■□□□□ 0.63
COL16A1Q07092 AL450346.2-201ENST00000495602 1024 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 AC099343.1-201ENST00000513481 609 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.97■□□□□ 0.63
COL16A1Q07092 AC104117.4-201ENST00000521486 847 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 SORD2P-201ENST00000558556 1069 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 PPY-202ENST00000587006 431 ntTSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL16A1Q07092 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.97■□□□□ 0.63
COL16A1Q07092 AC097474.1-201ENST00000506481 1371 ntBASIC18.97■□□□□ 0.63
COL16A1Q07092 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL16A1Q07092 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.97■□□□□ 0.63
COL16A1Q07092 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL16A1Q07092 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 SRP9P1-201ENST00000445874 261 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 OR4A49P-201ENST00000527050 632 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC18.96■□□□□ 0.63
COL16A1Q07092 AC023051.2-201ENST00000541141 460 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 MIR8071-1-201ENST00000616769 65 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 MIR8071-2-201ENST00000616772 65 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 AC026120.2-201ENST00000617239 309 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
COL16A1Q07092 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL16A1Q07092 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
COL16A1Q07092 FAM86FP-201ENST00000338711 969 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 AL161727.1-201ENST00000457409 530 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 GYG1-209ENST00000483267 801 ntTSL 2 BASIC18.96■□□□□ 0.63
COL16A1Q07092 RN7SL87P-201ENST00000497657 288 ntBASIC18.96■□□□□ 0.63
COL16A1Q07092 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.96■□□□□ 0.63
COL16A1Q07092 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 COG6-212ENST00000630730 186 ntTSL 5 BASIC18.96■□□□□ 0.63
COL16A1Q07092 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
COL16A1Q07092 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 AL031590.1-202ENST00000641466 1737 ntBASIC18.95■□□□□ 0.62
COL16A1Q07092 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL16A1Q07092 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL16A1Q07092 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL16A1Q07092 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 RFNG-202ENST00000429557 994 ntTSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 RN7SL33P-201ENST00000462543 342 ntBASIC18.95■□□□□ 0.62
COL16A1Q07092 COQ10BP2-201ENST00000513804 724 ntBASIC18.95■□□□□ 0.62
COL16A1Q07092 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.95■□□□□ 0.62
COL16A1Q07092 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC18.95■□□□□ 0.62
COL16A1Q07092 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms