Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 AL080243.2-201ENST00000418783 582 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 MIR3687-2-201ENST00000577708 61 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 AC092364.2-202ENST00000597012 1073 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 MIR3687-1-201ENST00000614492 61 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-1P43699 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 AC114271.1-201ENST00000612689 2813 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ELL2P1-201ENST00000413990 1906 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 AL158070.2-201ENST00000623713 1621 ntBASIC12.11□□□□□ -0.47
NKX2-1P43699 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 HSPA8P5-201ENST00000456928 2069 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NKX2-1P43699 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 AL645937.2-201ENST00000396808 931 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 RBPMS2P1-201ENST00000437762 623 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NKX2-1P43699 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX2-1P43699 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.1□□□□□ -0.47
NKX2-1P43699 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PTPRVP-205ENST00000641549 5067 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 AC068760.1-201ENST00000493579 1953 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms