Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 AL356585.2-201ENST00000625078 2396 ntBASIC15.78■□□□□ 0.12
SSR1P43307 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.78■□□□□ 0.12
SSR1P43307 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 AC011700.1-201ENST00000610409 2627 ntBASIC15.78■□□□□ 0.12
SSR1P43307 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 REXO1L1P-201ENST00000379010 6598 ntBASIC15.78■□□□□ 0.12
SSR1P43307 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SSR1P43307 AC236430.1-201ENST00000402231 743 ntBASIC15.77■□□□□ 0.12
SSR1P43307 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.77■□□□□ 0.12
SSR1P43307 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.77■□□□□ 0.12
SSR1P43307 TMEM261P1-201ENST00000604899 340 ntBASIC15.77■□□□□ 0.12
SSR1P43307 CU634019.7-201ENST00000624153 1185 ntBASIC15.77■□□□□ 0.12
SSR1P43307 FP236241.2-201ENST00000624906 1185 ntBASIC15.77■□□□□ 0.12
SSR1P43307 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SSR1P43307 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSR1P43307 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSR1P43307 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
SSR1P43307 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.77■□□□□ 0.11
SSR1P43307 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.77■□□□□ 0.11
SSR1P43307 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
SSR1P43307 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SSR1P43307 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SSR1P43307 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SSR1P43307 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SSR1P43307 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
SSR1P43307 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.76■□□□□ 0.11
SSR1P43307 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.76■□□□□ 0.11
SSR1P43307 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.76■□□□□ 0.11
SSR1P43307 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.76■□□□□ 0.11
SSR1P43307 BCRP1-201ENST00000444246 691 ntBASIC15.76■□□□□ 0.11
SSR1P43307 ELK1P1-201ENST00000485699 580 ntBASIC15.76■□□□□ 0.11
SSR1P43307 AC026434.2-201ENST00000506094 1078 ntBASIC15.76■□□□□ 0.11
SSR1P43307 AC022447.6-201ENST00000515522 438 ntBASIC15.76■□□□□ 0.11
SSR1P43307 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.76■□□□□ 0.11
SSR1P43307 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.76■□□□□ 0.11
SSR1P43307 RN7SL204P-201ENST00000582831 262 ntBASIC15.76■□□□□ 0.11
SSR1P43307 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSR1P43307 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SSR1P43307 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.76■□□□□ 0.11
SSR1P43307 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.76■□□□□ 0.11
SSR1P43307 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SSR1P43307 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms