Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CEACAM3P40198 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CEACAM3P40198 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 MIR658-201ENST00000385210 100 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.07□□□□□ -0.48
CEACAM3P40198 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 GCOM2-201ENST00000509133 1104 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 AC131206.1-201ENST00000538078 1211 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 AC008825.2-201ENST00000603374 718 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CEACAM3P40198 COX11-210ENST00000639671 696 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 AC002472.3-201ENST00000640124 621 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 CICP23-201ENST00000605013 2741 ntBASIC12.07□□□□□ -0.48
CEACAM3P40198 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CEACAM3P40198 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.07□□□□□ -0.48
CEACAM3P40198 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.07□□□□□ -0.48
CEACAM3P40198 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 AC007686.3-201ENST00000619017 3487 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 AC018529.2-202ENST00000611482 3087 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CEACAM3P40198 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 AC004945.1-201ENST00000416738 983 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.06□□□□□ -0.48
CEACAM3P40198 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 AC022210.1-201ENST00000449856 793 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 AL035414.1-201ENST00000451327 857 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CEACAM3P40198 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CEACAM3P40198 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.06□□□□□ -0.48
CEACAM3P40198 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.06□□□□□ -0.48
CEACAM3P40198 BX088702.1-201ENST00000610784 235 ntBASIC12.06□□□□□ -0.48
CEACAM3P40198 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms